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Bioinformatics Software Development for Analysis and Management of Next Generation Sequencing “Omics” Data - Ireland
At University College Cork and Alimentary Pharmabiotic Centre we have terabytes of sequencing data from thousands of samples from human and mammalian gastrointestinal tracts. These datasets have been generated using Next Generation Sequencing (NGS) Technologies and include sequencing from 16S amplicons (microbiota composition), shotgun metagenomics (encoded microbiota function) and metatranscriptomics (expressed microbiota function). Bioinformatic analysis and management of these types of “omics” data is a world‐wide challenge due to the constantly improving sequencing and sampling technologies.The aim for the successful Postdoc candidate is to develop novel computational methods for analysing and managing NGS data from microbial “omics” studies of the gastrointestinal tract. This will be in order to efficiently investigate functions and variability relevant to our gastrointestinal environment in both health and disease. Integration of the types of datasets with other clinical and heal ... (Training Available by Irish Universities Association (IUA)) Bioinformatics Software Development for Analysis and Management of Next Generation Sequencing “Omics” Data
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